Skip to content

Reference

These pages describe GVClass 2.0.0. The public setup-download archive installs database DB_VERSION v2.0.0. Consult these pages for a specific flag, configuration key, output column, or marker panel.

  • CLI: every command-line flag, with its default value.
  • Configuration: the gvclass_config.yaml keys and how they override built-in defaults.
  • Output: the output file names and the full 44-column summary schema.
  • Markers: the marker panels and the nine genetic codes.

Note

For step-by-step recipes, see the how-to guides. For the reasoning behind the taxonomy and quality metrics, see Explanation.